NCBI Gene provides information for genes from a wide range of species. A record may include nomenclature, Reference Sequences (RefSeqs), maps, pathways, variations, phenotypes, and links to genome-, phenotype-, and locus-specific resources worldwide.
Keywords: genome, gene, DNA
Homepage: http://www.ncbi.nlm.nih.gov/gene
Organization: NCBI
Identifier Regex Pattern: ^\d+$
SPARQL Endpoint URL: http://cu.ncbigene.bio2rdf.org/sparql
Faceted Browser URL: http://cu.ncbigene.bio2rdf.org/fct
Conversion Script URL: http://github.com/bio2rdf/bio2rdf-scripts/tree/master/ncbigene
Download URL: http://download.bio2rdf.org/#/release/3/ncbigene
Triples | 1966214397 |
Distinct Entities | 185330642 |
Distinct Properties | 70 |
Distinct Subjects | 185330642 |
Distinct Objects | 218690137 |
Distinct Literals | 745967736 |
Distinct Types | 34 |
Object Property | Distinct Objects | Total Objects |
---|---|---|
x taxonomy [ncbigene_vocabulary:x-taxonomy] http://bio2rdf.org/ncbigene_vocabulary:x-taxonomy |
12829 | 16009333 |
protein accession [ncbigene_vocabulary:protein-accession] http://bio2rdf.org/ncbigene_vocabulary:protein-accession |
437665 | 437665 |
x ensembl.protein [ncbigene_vocabulary:x-ensembl.protein] http://bio2rdf.org/ncbigene_vocabulary:x-ensembl.protein |
437670 | 437670 |
x unists [ncbigene_vocabulary:x-unists] http://bio2rdf.org/ncbigene_vocabulary:x-unists |
361073 | 1173646 |
mature peptide accession.version [ncbigene_vocabulary:mature-peptide-accession.version] http://bio2rdf.org/ncbigene_vocabulary:mature-peptide-accession.version |
3400 | 3400 |
x ensembl.rna [ncbigene_vocabulary:x-ensembl.rna] http://bio2rdf.org/ncbigene_vocabulary:x-ensembl.rna |
445262 | 445262 |
gene process association [ncbigene_vocabulary:gene-process-association] http://bio2rdf.org/ncbigene_vocabulary:gene-process-association |
649855 | 649855 |
x unigene [ncbigene_vocabulary:x-unigene] http://bio2rdf.org/ncbigene_vocabulary:x-unigene |
527084 | 547028 |
x vega.gene [ncbigene_vocabulary:x-vega.gene] http://bio2rdf.org/ncbigene_vocabulary:x-vega.gene |
43972 | 43999 |
x ensembl.gene [ncbigene_vocabulary:x-ensembl.gene] http://bio2rdf.org/ncbigene_vocabulary:x-ensembl.gene |
409542 | 409542 |
process [ncbigene_vocabulary:process] http://bio2rdf.org/ncbigene_vocabulary:process |
14390 | 657532 |
publication [ncbigene_vocabulary:publication] http://bio2rdf.org/ncbigene_vocabulary:publication |
80285 | 398368 |
rna nucleotide gi [ncbigene_vocabulary:rna-nucleotide-gi] http://bio2rdf.org/ncbigene_vocabulary:rna-nucleotide-gi |
8936168 | 8938559 |
rna accession.version [ncbigene_vocabulary:rna-accession.version] http://bio2rdf.org/ncbigene_vocabulary:rna-accession.version |
445256 | 445256 |
component [ncbigene_vocabulary:component] http://bio2rdf.org/ncbigene_vocabulary:component |
1986 | 393032 |
mature peptide gi [ncbigene_vocabulary:mature-peptide-gi] http://bio2rdf.org/ncbigene_vocabulary:mature-peptide-gi |
3400 | 3400 |
gene function association [ncbigene_vocabulary:gene-function-association] http://bio2rdf.org/ncbigene_vocabulary:gene-function-association |
404713 | 404713 |
gene component association [ncbigene_vocabulary:gene-component-association] http://bio2rdf.org/ncbigene_vocabulary:gene-component-association |
386160 | 386160 |
genomic nucleotide gi [ncbigene_vocabulary:genomic-nucleotide-gi] http://bio2rdf.org/ncbigene_vocabulary:genomic-nucleotide-gi |
8635242 | 41314456 |
evidence [ncbigene_vocabulary:evidence] http://bio2rdf.org/ncbigene_vocabulary:evidence |
21 | 1599071 |
x pubmed [ncbigene_vocabulary:x-pubmed] http://bio2rdf.org/ncbigene_vocabulary:x-pubmed |
873968 | 12967808 |
protein accession.version [ncbigene_vocabulary:protein-accession.version] http://bio2rdf.org/ncbigene_vocabulary:protein-accession.version |
30437156 | 32693226 |
identifiers.org URI http://bio2rdf.org/bio2rdf_vocabulary:x-identifiers.org |
70705934 | 70705934 |
gene [ncbigene_vocabulary:gene] http://bio2rdf.org/ncbigene_vocabulary:gene |
211429 | 1440728 |
go term [ncbigene_vocabulary:go-term] http://bio2rdf.org/ncbigene_vocabulary:go-term |
22393 | 1440728 |
function [ncbigene_vocabulary:function] http://bio2rdf.org/ncbigene_vocabulary:function |
6140 | 408337 |
protein gi [ncbigene_vocabulary:protein-gi] http://bio2rdf.org/ncbigene_vocabulary:protein-gi |
30436984 | 32693052 |
x vega.rna [ncbigene_vocabulary:x-vega.rna] http://bio2rdf.org/ncbigene_vocabulary:x-vega.rna |
55619 | 55619 |
x vega.protein [ncbigene_vocabulary:x-vega.protein] http://bio2rdf.org/ncbigene_vocabulary:x-vega.protein |
55796 | 55796 |
rna nucleotide accession.version [ncbigene_vocabulary:rna-nucleotide-accession.version] http://bio2rdf.org/ncbigene_vocabulary:rna-nucleotide-accession.version |
8936387 | 8938778 |
genomic nucleotide accession.version [ncbigene_vocabulary:genomic-nucleotide-accession.version] http://bio2rdf.org/ncbigene_vocabulary:genomic-nucleotide-accession.version |
8635278 | 41316439 |
http://purl.org/dc/terms/publisher | 2 | 18 |
http://biohackathon.org/resource/faldo#location | 21755386 | 21760346 |
http://biohackathon.org/resource/faldo#begin | 21746295 | 21755386 |
http://www.w3.org/1999/02/22-rdf-syntax-ns#type | 36 | 327068021 |
http://biohackathon.org/resource/faldo#end | 21746295 | 21755386 |
http://xmlns.com/foaf/0.1/page | 2 | 18 |
http://biohackathon.org/resource/faldo#reference | 3231376 | 43261298 |
http://rdfs.org/ns/void#inDataset | 1 | 185330600 |
http://purl.org/dc/terms/license | 2 | 18 |
http://purl.org/dc/terms/source | 9 | 9 |
http://purl.org/dc/terms/creator | 1 | 9 |
http://www.w3.org/ns/dcat#distribution | 18 | 18 |
Unique Objects | Total Objects | Subject Type | Property |
---|
Total Subjects | Distinct Subjects | Subject Type | Property | Object Type | Distinct Objects | Total Objects |
---|
Dataset | Property | Dataset |
---|---|---|
ncbigene | publication [ncbigene_vocabulary:publication] http://bio2rdf.org/ncbigene_vocabulary:publication |
pubmed |
ncbigene | genomic nucleotide gi [ncbigene_vocabulary:genomic-nucleotide-gi] http://bio2rdf.org/ncbigene_vocabulary:genomic-nucleotide-gi |
gi |
ncbigene | mature peptide gi [ncbigene_vocabulary:mature-peptide-gi] http://bio2rdf.org/ncbigene_vocabulary:mature-peptide-gi |
gi |
ncbigene | function [ncbigene_vocabulary:function] http://bio2rdf.org/ncbigene_vocabulary:function |
go |
ncbigene | genomic nucleotide accession.version [ncbigene_vocabulary:genomic-nucleotide-accession.version] http://bio2rdf.org/ncbigene_vocabulary:genomic-nucleotide-accession.version |
genbank |
ncbigene | go term [ncbigene_vocabulary:go-term] http://bio2rdf.org/ncbigene_vocabulary:go-term |
go |
ncbigene | x ensembl.rna [ncbigene_vocabulary:x-ensembl.rna] http://bio2rdf.org/ncbigene_vocabulary:x-ensembl.rna |
ensembl |
ncbigene | mature peptide accession.version [ncbigene_vocabulary:mature-peptide-accession.version] http://bio2rdf.org/ncbigene_vocabulary:mature-peptide-accession.version |
refseq |
ncbigene | x vega.rna [ncbigene_vocabulary:x-vega.rna] http://bio2rdf.org/ncbigene_vocabulary:x-vega.rna |
vega |
ncbigene | x taxonomy [ncbigene_vocabulary:x-taxonomy] http://bio2rdf.org/ncbigene_vocabulary:x-taxonomy |
taxonomy |
ncbigene | process [ncbigene_vocabulary:process] http://bio2rdf.org/ncbigene_vocabulary:process |
go |
ncbigene | evidence [ncbigene_vocabulary:evidence] http://bio2rdf.org/ncbigene_vocabulary:evidence |
eco |
ncbigene | x vega.gene [ncbigene_vocabulary:x-vega.gene] http://bio2rdf.org/ncbigene_vocabulary:x-vega.gene |
vega |
ncbigene | rna nucleotide gi [ncbigene_vocabulary:rna-nucleotide-gi] http://bio2rdf.org/ncbigene_vocabulary:rna-nucleotide-gi |
gi |
ncbigene | rna nucleotide accession.version [ncbigene_vocabulary:rna-nucleotide-accession.version] http://bio2rdf.org/ncbigene_vocabulary:rna-nucleotide-accession.version |
genbank |
ncbigene | genomic nucleotide accession.version [ncbigene_vocabulary:genomic-nucleotide-accession.version] http://bio2rdf.org/ncbigene_vocabulary:genomic-nucleotide-accession.version |
refseq |
ncbigene | x ensembl.protein [ncbigene_vocabulary:x-ensembl.protein] http://bio2rdf.org/ncbigene_vocabulary:x-ensembl.protein |
ensembl |
ncbigene | protein accession [ncbigene_vocabulary:protein-accession] http://bio2rdf.org/ncbigene_vocabulary:protein-accession |
genbank |
ncbigene | protein gi [ncbigene_vocabulary:protein-gi] http://bio2rdf.org/ncbigene_vocabulary:protein-gi |
gi |
ncbigene | x pubmed [ncbigene_vocabulary:x-pubmed] http://bio2rdf.org/ncbigene_vocabulary:x-pubmed |
pubmed |
ncbigene | rna nucleotide accession.version [ncbigene_vocabulary:rna-nucleotide-accession.version] http://bio2rdf.org/ncbigene_vocabulary:rna-nucleotide-accession.version |
refseq |
ncbigene | protein accession.version [ncbigene_vocabulary:protein-accession.version] http://bio2rdf.org/ncbigene_vocabulary:protein-accession.version |
genbank |
ncbigene | x ensembl.gene [ncbigene_vocabulary:x-ensembl.gene] http://bio2rdf.org/ncbigene_vocabulary:x-ensembl.gene |
ensembl |
ncbigene | component [ncbigene_vocabulary:component] http://bio2rdf.org/ncbigene_vocabulary:component |
go |
ncbigene | x unigene [ncbigene_vocabulary:x-unigene] http://bio2rdf.org/ncbigene_vocabulary:x-unigene |
unigene |
ncbigene | protein accession.version [ncbigene_vocabulary:protein-accession.version] http://bio2rdf.org/ncbigene_vocabulary:protein-accession.version |
refseq |
ncbigene | rna accession.version [ncbigene_vocabulary:rna-accession.version] http://bio2rdf.org/ncbigene_vocabulary:rna-accession.version |
genbank |
ncbigene | x vega.protein [ncbigene_vocabulary:x-vega.protein] http://bio2rdf.org/ncbigene_vocabulary:x-vega.protein |
vega |
ncbigene | x unists [ncbigene_vocabulary:x-unists] http://bio2rdf.org/ncbigene_vocabulary:x-unists |
unists |
ncbigene | http://biohackathon.org/resource/faldo#reference | refseq |