HomoloGene is a system for automated detection of homologs among the annotated genes of several completely sequenced eukaryotic genomes.
Keywords: gene, genome
Homepage: http://wwww.ncbi.nlm.nih.gov/homologene
Organization: NCBI
Identifier Regex Pattern: ^\d+$
SPARQL Endpoint URL: http://cu.homologene.bio2rdf.org/sparql
Faceted Browser URL: http://cu.homologene.bio2rdf.org/fct
Conversion Script URL: http://github.com/bio2rdf/bio2rdf-scripts/tree/master/homologene
Download URL: http://download.bio2rdf.org/#/release/3/homologene
| Triples | 7189769 |
| Distinct Entities | 869985 |
| Distinct Properties | 24 |
| Distinct Subjects | 869985 |
| Distinct Objects | 1420482 |
| Distinct Literals | 2865030 |
| Distinct Types | 9 |
| Type | Count |
|---|---|
| Homologene Group [homologene_vocabulary:Homologene-Group] http://bio2rdf.org/homologene_vocabulary:Homologene-Group |
44233 |
| ncbigene resource [ncbigene_vocabulary:Resource] http://bio2rdf.org/ncbigene_vocabulary:Resource |
275237 |
| taxonomy resource [taxonomy_vocabulary:Resource] http://bio2rdf.org/taxonomy_vocabulary:Resource |
21 |
| homologene resource [homologene_vocabulary:Resource] http://bio2rdf.org/homologene_vocabulary:Resource |
44239 |
| gi resource [gi_vocabulary:Resource] http://bio2rdf.org/gi_vocabulary:Resource |
275237 |
| refseq resource [refseq_vocabulary:Resource] http://bio2rdf.org/refseq_vocabulary:Resource |
275237 |
| http://www.w3.org/2000/01/rdf-schema#Resource | 5 |
| http://www.w3.org/ns/dcat#Distribution | 2 |
| http://www.w3.org/2002/07/owl#ObjectProperty | 6 |
| http://www.w3.org/2002/07/owl#DatatypeProperty | 4 |
| http://purl.org/dc/terms/Dataset | 2 |
| http://www.w3.org/2002/07/owl#Class | 1 |
| Object Property | Distinct Objects | Total Objects |
|---|---|---|
| x ncbigene [homologene_vocabulary:x-ncbigene] http://bio2rdf.org/homologene_vocabulary:x-ncbigene |
275237 | 275237 |
| identifiers.org URI http://bio2rdf.org/bio2rdf_vocabulary:x-identifiers.org |
594728 | 594728 |
| x refseq [homologene_vocabulary:x-refseq] http://bio2rdf.org/homologene_vocabulary:x-refseq |
275237 | 275237 |
| x gi [homologene_vocabulary:x-gi] http://bio2rdf.org/homologene_vocabulary:x-gi |
275237 | 275237 |
| x taxid [homologene_vocabulary:x-taxid] http://bio2rdf.org/homologene_vocabulary:x-taxid |
21 | 233935 |
| http://rdfs.org/ns/void#inDataset | 1 | 869971 |
| http://purl.org/dc/terms/publisher | 2 | 2 |
| http://purl.org/dc/terms/license | 2 | 2 |
| http://purl.org/dc/terms/creator | 1 | 1 |
| http://xmlns.com/foaf/0.1/page | 2 | 2 |
| http://www.w3.org/1999/02/22-rdf-syntax-ns#type | 12 | 914224 |
| http://www.w3.org/ns/dcat#distribution | 2 | 2 |
| http://purl.org/dc/terms/source | 1 | 1 |
| Datatype Property | Distinct Literals | Literals |
|---|---|---|
| Bio2RDF identifier http://bio2rdf.org/bio2rdf_vocabulary:identifier |
857986 | 869971 |
| Bio2RDF namespace http://bio2rdf.org/bio2rdf_vocabulary:namespace |
6 | 869971 |
| Bio2RDF uri http://bio2rdf.org/bio2rdf_vocabulary:uri |
869971 | 869971 |
| gene symbol [homologene_vocabulary:gene-symbol] http://bio2rdf.org/homologene_vocabulary:gene-symbol |
178598 | 182805 |
| http://purl.org/dc/terms/title | 44241 | 44241 |
| http://purl.org/dc/terms/format | 3 | 3 |
| http://purl.org/pav/retrievedOn | 1 | 1 |
| http://www.w3.org/2000/01/rdf-schema#label | 44251 | 44251 |
| http://purl.org/dc/terms/rights | 3 | 4 |
| http://purl.org/dc/terms/identifier | 869971 | 869971 |
| http://purl.org/dc/terms/created | 1 | 1 |
| Dataset | Property | Dataset |
|---|---|---|
| homologene | x ncbigene [homologene_vocabulary:x-ncbigene] http://bio2rdf.org/homologene_vocabulary:x-ncbigene |
ncbigene |
| homologene | x taxid [homologene_vocabulary:x-taxid] http://bio2rdf.org/homologene_vocabulary:x-taxid |
taxonomy |
| homologene | x refseq [homologene_vocabulary:x-refseq] http://bio2rdf.org/homologene_vocabulary:x-refseq |
refseq |
| homologene | x gi [homologene_vocabulary:x-gi] http://bio2rdf.org/homologene_vocabulary:x-gi |
gi |