HUGO Gene Nomenclature Committee

The HGNC gives unique and meaningful names to every human gene. For each known human gene we approve a gene name and symbol (short-form abbreviation). All approved symbols are stored in the HGNC database.

Keywords: classification, gene

Namespace: hgnc

Homepage: http://www.genenames.org/

Organization: HGNC

License: No restrictions are imposed on access to, or use of, the data provided by the HGNC, which are provided to enhance knowledge and encourage progress in the scientific community.

SPARQL Endpoint URL: http://cu.hgnc.bio2rdf.org/sparql

Faceted Browser URL: http://cu.hgnc.bio2rdf.org/fct

Conversion Script URL: http://github.com/bio2rdf/bio2rdf-scripts/tree/master/hgnc

Download URL: http://download.bio2rdf.org/release/2/hgnc

Basic data metrics

Endpoint URLhttp://cu.hgnc.bio2rdf.org/sparql
Number of Triples836060
Unique Subject count37227
Unique Predicate count44
Unique Object count519628

List of unique types and their frequencies

Type URICount
http://bio2rdf.org/hgnc_vocabulary:GeneSymbol37225
http://rdfs.org/ns/void#Dataset2
http://bio2rdf.org/dataset_vocabulary:Endpoint1

List of the unique predicate-object links and their counts

Predicate URIObject Count
http://rdfs.org/ns/void#inDataset37225
http://purl.org/dc/terms/license2
http://www.w3.org/2000/01/rdf-schema#seeAlso1
http://purl.org/dc/terms/creator1
http://bio2rdf.org/hgnc_vocabulary:x-ensembl28405
http://bio2rdf.org/hgnc_vocabulary:x-pubmed27890
http://bio2rdf.org/hgnc_vocabulary:x-ccd26789
http://bio2rdf.org/hgnc_vocabulary:specialist_database_link25066
http://bio2rdf.org/hgnc_vocabulary:x-vega23464
http://bio2rdf.org/hgnc_vocabulary:x-ucsc20884
http://bio2rdf.org/hgnc_vocabulary:x-uniprot19701
http://purl.org/dc/terms/publisher1
http://xmlns.com/foaf/0.1/homepage1
http://rdfs.org/ns/void#sparqlEndpoint1
http://rdfs.org/ns/void#dataDump1
http://www.w3.org/ns/prov#wasDerivedFrom1
http://www.w3.org/1999/02/22-rdf-syntax-ns#type37228
http://bio2rdf.org/hgnc_vocabulary:x-refseq36527
http://bio2rdf.org/hgnc_vocabulary:x-geneid33109
http://bio2rdf.org/hgnc_vocabulary:x-mgi17763
http://bio2rdf.org/hgnc_vocabulary:x-rgd15682
http://bio2rdf.org/hgnc_vocabulary:x-omim13806
http://bio2rdf.org/dataset_vocabulary:has_predicate_unique_subject_unique_object_count22
http://bio2rdf.org/dataset_vocabulary:has_predicate_literal_count22
http://bio2rdf.org/dataset_vocabulary:has_predicate_unique_subject_unique_literal_count22
http://bio2rdf.org/dataset_vocabulary:has_predicate_object_count22
http://bio2rdf.org/dataset_vocabulary:has_url1
http://bio2rdf.org/dataset_vocabulary:has_predicate90
http://bio2rdf.org/dataset_vocabulary:has_type2
http://bio2rdf.org/dataset_vocabulary:has_object_type2
http://bio2rdf.org/dataset_vocabulary:has_type_relation_type_count2
http://bio2rdf.org/dataset_vocabulary:has_type_count2
http://bio2rdf.org/dataset_vocabulary:has_subject_type2

List of the unique predicate-literal links and their counts

Predicate URILiteral Count
http://www.w3.org/2000/01/rdf-schema#label37228
http://purl.org/dc/terms/identifier37225
http://bio2rdf.org/hgnc_vocabulary:approved_symbol37225
http://bio2rdf.org/hgnc_vocabulary:approved_name37225
http://bio2rdf.org/hgnc_vocabulary:status37225
http://bio2rdf.org/hgnc_vocabulary:record_type37225
http://bio2rdf.org/hgnc_vocabulary:date_modified37153
http://bio2rdf.org/hgnc_vocabulary:chromosome33529
http://bio2rdf.org/hgnc_vocabulary:accession_number19619
http://bio2rdf.org/hgnc_vocabulary:gene_family_tag14083
http://bio2rdf.org/hgnc_vocabulary:date_name_changed11641
http://bio2rdf.org/hgnc_vocabulary:name_synonym7757
http://bio2rdf.org/hgnc_vocabulary:date_symbol_changed7215
http://bio2rdf.org/hgnc_vocabulary:enzyme_id1413
http://purl.org/dc/terms/created1
http://bio2rdf.org/hgnc_vocabulary:synonym37409
http://bio2rdf.org/hgnc_vocabulary:date_approved32866
http://bio2rdf.org/hgnc_vocabulary:previous_name19355
http://bio2rdf.org/hgnc_vocabulary:gene_family_description14346
http://bio2rdf.org/hgnc_vocabulary:previous_symbol11401
http://bio2rdf.org/hgnc_vocabulary:locus_specific_databases1369
http://purl.org/dc/terms/rights4
http://bio2rdf.org/dataset_vocabulary:has_subject_count46
http://bio2rdf.org/dataset_vocabulary:has_count46
http://bio2rdf.org/dataset_vocabulary:has_literal_count22
http://bio2rdf.org/dataset_vocabulary:has_unique_predicate_count1
http://bio2rdf.org/dataset_vocabulary:has_object_count24
http://bio2rdf.org/dataset_vocabulary:has_triple_count1
http://bio2rdf.org/dataset_vocabulary:has_unique_object_count1
http://bio2rdf.org/dataset_vocabulary:has_unique_subject_count1

List of the total number of unique subject-predicate-unique object links

Subject CountPredicate URIObject Count
1http://purl.org/dc/terms/creator1
1http://xmlns.com/foaf/0.1/homepage1
37225http://rdfs.org/ns/void#inDataset1
28329http://bio2rdf.org/hgnc_vocabulary:x-ensembl28372
20466http://bio2rdf.org/hgnc_vocabulary:x-pubmed16196
30357http://bio2rdf.org/hgnc_vocabulary:x-refseq35782
23370http://bio2rdf.org/hgnc_vocabulary:x-vega22831
19701http://bio2rdf.org/hgnc_vocabulary:x-uniprot19525
20884http://bio2rdf.org/hgnc_vocabulary:x-ucsc20884
1http://rdfs.org/ns/void#dataDump1
1http://www.w3.org/ns/prov#wasDerivedFrom1
1http://rdfs.org/ns/void#sparqlEndpoint1
18437http://bio2rdf.org/hgnc_vocabulary:x-ccd26789
37228http://www.w3.org/1999/02/22-rdf-syntax-ns#type3
1http://www.w3.org/2000/01/rdf-schema#seeAlso1
1http://purl.org/dc/terms/publisher1
33035http://bio2rdf.org/hgnc_vocabulary:x-geneid33106
25066http://bio2rdf.org/hgnc_vocabulary:specialist_database_link24926
13806http://bio2rdf.org/hgnc_vocabulary:x-omim13806
17681http://bio2rdf.org/hgnc_vocabulary:x-mgi17735
15682http://bio2rdf.org/hgnc_vocabulary:x-rgd15682
2http://purl.org/dc/terms/license2
1http://bio2rdf.org/dataset_vocabulary:has_predicate_literal_count22
90http://bio2rdf.org/dataset_vocabulary:has_predicate44
2http://bio2rdf.org/dataset_vocabulary:has_subject_type2
2http://bio2rdf.org/dataset_vocabulary:has_type2
1http://bio2rdf.org/dataset_vocabulary:has_url1
1http://bio2rdf.org/dataset_vocabulary:has_predicate_unique_subject_unique_literal_count22
1http://bio2rdf.org/dataset_vocabulary:has_predicate_object_count22
1http://bio2rdf.org/dataset_vocabulary:has_predicate_unique_subject_unique_object_count22
2http://bio2rdf.org/dataset_vocabulary:has_object_type1
1http://bio2rdf.org/dataset_vocabulary:has_type_relation_type_count2
1http://bio2rdf.org/dataset_vocabulary:has_type_count2

List of the total number of unique subject-predicate-unique literal links

Subject CountPredicate URILiteral Count
37228http://www.w3.org/2000/01/rdf-schema#label37228
37225http://bio2rdf.org/hgnc_vocabulary:approved_symbol37225
33529http://bio2rdf.org/hgnc_vocabulary:chromosome2627
9361http://bio2rdf.org/hgnc_vocabulary:previous_symbol11275
19072http://bio2rdf.org/hgnc_vocabulary:accession_number19180
2http://purl.org/dc/terms/rights4
1351http://bio2rdf.org/hgnc_vocabulary:enzyme_id779
1369http://bio2rdf.org/hgnc_vocabulary:locus_specific_databases1169
1http://purl.org/dc/terms/created1
37225http://purl.org/dc/terms/identifier37225
37225http://bio2rdf.org/hgnc_vocabulary:approved_name35962
37225http://bio2rdf.org/hgnc_vocabulary:status3
32866http://bio2rdf.org/hgnc_vocabulary:date_approved3693
37225http://bio2rdf.org/hgnc_vocabulary:record_type1
11208http://bio2rdf.org/hgnc_vocabulary:previous_name14349
7215http://bio2rdf.org/hgnc_vocabulary:date_symbol_changed1395
14346http://bio2rdf.org/hgnc_vocabulary:gene_family_description603
4644http://bio2rdf.org/hgnc_vocabulary:name_synonym6993
37153http://bio2rdf.org/hgnc_vocabulary:date_modified2517
19632http://bio2rdf.org/hgnc_vocabulary:synonym36270
11641http://bio2rdf.org/hgnc_vocabulary:date_name_changed1632
14083http://bio2rdf.org/hgnc_vocabulary:gene_family_tag618
1http://bio2rdf.org/dataset_vocabulary:has_triple_count1
22http://bio2rdf.org/dataset_vocabulary:has_literal_count20
1http://bio2rdf.org/dataset_vocabulary:has_unique_object_count1
24http://bio2rdf.org/dataset_vocabulary:has_object_count14
46http://bio2rdf.org/dataset_vocabulary:has_count31
1http://bio2rdf.org/dataset_vocabulary:has_unique_subject_count1
46http://bio2rdf.org/dataset_vocabulary:has_subject_count30
1http://bio2rdf.org/dataset_vocabulary:has_unique_predicate_count1

List of the total number of subject type-predicate-object type links

Subject TypeSubject CountPredicateObject TypeObject Count
http://bio2rdf.org/hgnc_vocabulary:GeneSymbol37225http://rdfs.org/ns/void#inDatasethttp://rdfs.org/ns/void#Dataset1
http://rdfs.org/ns/void#Dataset1http://www.w3.org/ns/prov#wasDerivedFromhttp://rdfs.org/ns/void#Dataset1

Inter and Intra dataset namespace links

NamespaceNamespaceCounts
http://bio2rdf.org/ucschttp://bio2rdf.org/hgnc20884
http://bio2rdf.org/bio2rdf_datasethttp://bio2rdf.org/hgnc37270
http://bio2rdf.org/hgnc_vocabularyhttp://bio2rdf.org/hgnc37270
http://bio2rdf.org/ccdhttp://bio2rdf.org/hgnc26792
http://bio2rdf.org/ensemblhttp://bio2rdf.org/hgnc51104
http://bio2rdf.org/geneidhttp://bio2rdf.org/hgnc63470
http://bio2rdf.org/mgihttp://bio2rdf.org/hgnc28862
http://bio2rdf.org/omimhttp://bio2rdf.org/hgnc13817
http://bio2rdf.org/pubmedhttp://bio2rdf.org/hgnc27920
http://bio2rdf.org/refseqhttp://bio2rdf.org/hgnc53860
http://bio2rdf.org/rgdhttp://bio2rdf.org/hgnc15692
http://bio2rdf.org/uniprothttp://bio2rdf.org/hgnc19697
http://bio2rdf.org/vegahttp://bio2rdf.org/hgnc23509